Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AC117500.6-201ENST00000624871 588 ntBASIC15.29■□□□□ 0.04
FREM1Q5H8C1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AP002414.3-201ENST00000589352 1468 ntBASIC15.29■□□□□ 0.04
FREM1Q5H8C1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AC046185.3-201ENST00000623228 1824 ntBASIC15.29■□□□□ 0.04
FREM1Q5H8C1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 CROCCP2-202ENST00000412962 2773 ntBASIC15.29■□□□□ 0.04
FREM1Q5H8C1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AC007967.2-201ENST00000432613 625 ntBASIC15.29■□□□□ 0.04
FREM1Q5H8C1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AC002558.1-201ENST00000488906 803 ntBASIC15.29■□□□□ 0.04
FREM1Q5H8C1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 AC140113.2-201ENST00000604370 208 ntBASIC15.29■□□□□ 0.04
FREM1Q5H8C1 PCDHB18P-201ENST00000524813 2368 ntBASIC15.29■□□□□ 0.04
FREM1Q5H8C1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.29■□□□□ 0.04
FREM1Q5H8C1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AL645608.8-201ENST00000606034 2086 ntBASIC15.28■□□□□ 0.04
FREM1Q5H8C1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AC108751.1-201ENST00000490852 363 ntBASIC15.28■□□□□ 0.04
FREM1Q5H8C1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 AC018845.2-201ENST00000568326 409 ntBASIC15.28■□□□□ 0.04
FREM1Q5H8C1 FAM215A-202ENST00000632077 792 ntBASIC15.28■□□□□ 0.04
FREM1Q5H8C1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
FREM1Q5H8C1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 UNC93B6-202ENST00000528242 690 ntBASIC15.27■□□□□ 0.04
FREM1Q5H8C1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FREM1Q5H8C1 AC139713.2-201ENST00000641328 2723 ntBASIC15.27■□□□□ 0.03
FREM1Q5H8C1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM1Q5H8C1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM1Q5H8C1 LINC00896-202ENST00000609602 2128 ntBASIC15.27■□□□□ 0.03
FREM1Q5H8C1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms