Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX6-1P78426 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NKX6-1P78426 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX6-1P78426 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.39■□□□□ 0.05
NKX6-1P78426 RCN1P2-201ENST00000398357 915 ntBASIC15.39■□□□□ 0.05
NKX6-1P78426 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.39■□□□□ 0.05
NKX6-1P78426 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NKX6-1P78426 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.39■□□□□ 0.05
NKX6-1P78426 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX6-1P78426 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 AL139424.1-201ENST00000607572 797 ntBASIC15.39■□□□□ 0.05
NKX6-1P78426 AC027601.4-201ENST00000611259 610 ntBASIC15.39■□□□□ 0.05
NKX6-1P78426 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
NKX6-1P78426 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NKX6-1P78426 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX6-1P78426 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.38■□□□□ 0.05
NKX6-1P78426 KRT8P47-201ENST00000604727 1398 ntBASIC15.38■□□□□ 0.05
NKX6-1P78426 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NKX6-1P78426 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
NKX6-1P78426 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX6-1P78426 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
NKX6-1P78426 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.38■□□□□ 0.05
NKX6-1P78426 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 FGFR3P6-201ENST00000457012 610 ntBASIC15.38■□□□□ 0.05
NKX6-1P78426 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 AC009533.2-201ENST00000543664 586 ntBASIC15.38■□□□□ 0.05
NKX6-1P78426 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX6-1P78426 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX6-1P78426 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX6-1P78426 REXO1L9P-201ENST00000604264 2108 ntBASIC15.38■□□□□ 0.05
NKX6-1P78426 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 TP73-AS1-210ENST00000637775 1455 ntBASIC15.38■□□□□ 0.05
NKX6-1P78426 BICD1-207ENST00000551848 1962 ntBASIC15.38■□□□□ 0.05
NKX6-1P78426 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 AC097374.2-201ENST00000618617 1306 ntBASIC15.38■□□□□ 0.05
NKX6-1P78426 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NKX6-1P78426 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX6-1P78426 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NKX6-1P78426 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX6-1P78426 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX6-1P78426 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.37■□□□□ 0.05
NKX6-1P78426 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NKX6-1P78426 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
NKX6-1P78426 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NKX6-1P78426 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.37■□□□□ 0.05
NKX6-1P78426 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.37■□□□□ 0.05
NKX6-1P78426 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.37■□□□□ 0.05
NKX6-1P78426 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NKX6-1P78426 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.37■□□□□ 0.05
NKX6-1P78426 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms