Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.32■□□□□ 0.04
SEC61A1P61619 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.32■□□□□ 0.04
SEC61A1P61619 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SEC61A1P61619 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.32■□□□□ 0.04
SEC61A1P61619 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
SEC61A1P61619 DOC2GP-204ENST00000639052 2548 ntBASIC15.32■□□□□ 0.04
SEC61A1P61619 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.32■□□□□ 0.04
SEC61A1P61619 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.32■□□□□ 0.04
SEC61A1P61619 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.32■□□□□ 0.04
SEC61A1P61619 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
SEC61A1P61619 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SEC61A1P61619 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.32■□□□□ 0.04
SEC61A1P61619 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.32■□□□□ 0.04
SEC61A1P61619 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 AC006116.8-202ENST00000587620 1550 ntBASIC15.32■□□□□ 0.04
SEC61A1P61619 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
SEC61A1P61619 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SEC61A1P61619 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.31■□□□□ 0.04
SEC61A1P61619 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SEC61A1P61619 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SEC61A1P61619 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.31■□□□□ 0.04
SEC61A1P61619 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC61A1P61619 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.31■□□□□ 0.04
SEC61A1P61619 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.31■□□□□ 0.04
SEC61A1P61619 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC61A1P61619 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SEC61A1P61619 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC61A1P61619 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SEC61A1P61619 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.3■□□□□ 0.04
SEC61A1P61619 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms