Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13□□□□□ -0.33
CMC4P56277 AC093909.1-201ENST00000504731 1122 ntBASIC13□□□□□ -0.33
CMC4P56277 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13□□□□□ -0.33
CMC4P56277 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13□□□□□ -0.33
CMC4P56277 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13□□□□□ -0.33
CMC4P56277 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13□□□□□ -0.33
CMC4P56277 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 AP001269.4-201ENST00000609611 512 ntBASIC13□□□□□ -0.33
CMC4P56277 AL589182.2-201ENST00000619332 1049 ntBASIC13□□□□□ -0.33
CMC4P56277 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CMC4P56277 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CMC4P56277 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CMC4P56277 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CMC4P56277 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.99□□□□□ -0.33
CMC4P56277 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.99□□□□□ -0.33
CMC4P56277 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.99□□□□□ -0.33
CMC4P56277 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 AC139887.3-201ENST00000568585 713 ntBASIC12.99□□□□□ -0.33
CMC4P56277 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 REXO1L11P-201ENST00000620964 1927 ntBASIC12.99□□□□□ -0.33
CMC4P56277 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 AC046185.3-201ENST00000623228 1824 ntBASIC12.99□□□□□ -0.33
CMC4P56277 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CMC4P56277 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMC4P56277 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.99□□□□□ -0.33
CMC4P56277 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.98□□□□□ -0.33
CMC4P56277 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.98□□□□□ -0.33
CMC4P56277 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CMC4P56277 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.98□□□□□ -0.33
CMC4P56277 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 NCF1C-201ENST00000438382 1427 ntBASIC12.98□□□□□ -0.33
CMC4P56277 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CMC4P56277 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CMC4P56277 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CMC4P56277 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.98□□□□□ -0.33
CMC4P56277 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CMC4P56277 AC132938.5-201ENST00000624980 1813 ntBASIC12.98□□□□□ -0.33
CMC4P56277 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 ACTG1P4-201ENST00000425123 1122 ntBASIC12.98□□□□□ -0.33
CMC4P56277 FGFR3P6-201ENST00000457012 610 ntBASIC12.98□□□□□ -0.33
CMC4P56277 AL160237.2-201ENST00000556165 472 ntBASIC12.98□□□□□ -0.33
CMC4P56277 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.98□□□□□ -0.33
CMC4P56277 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.98□□□□□ -0.33
CMC4P56277 PGM5P2-202ENST00000637225 1043 ntBASIC12.98□□□□□ -0.33
CMC4P56277 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CMC4P56277 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CMC4P56277 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMC4P56277 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms