Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NKX2-5P52952 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 AC007191.1-201ENST00000623179 2995 ntBASIC14.84□□□□□ -0.03
NKX2-5P52952 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-5P52952 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.84□□□□□ -0.03
NKX2-5P52952 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.84□□□□□ -0.03
NKX2-5P52952 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.84□□□□□ -0.03
NKX2-5P52952 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-5P52952 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-5P52952 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-5P52952 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-5P52952 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-5P52952 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.84□□□□□ -0.03
NKX2-5P52952 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-5P52952 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-5P52952 PTENP1-202ENST00000532280 3996 ntBASIC14.83□□□□□ -0.03
NKX2-5P52952 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.83□□□□□ -0.03
NKX2-5P52952 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NKX2-5P52952 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-5P52952 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.83□□□□□ -0.03
NKX2-5P52952 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
NKX2-5P52952 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.83□□□□□ -0.03
NKX2-5P52952 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-5P52952 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.83□□□□□ -0.03
NKX2-5P52952 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-5P52952 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-5P52952 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-5P52952 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NKX2-5P52952 AP006587.1-201ENST00000534129 1502 ntBASIC14.83□□□□□ -0.04
NKX2-5P52952 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX2-5P52952 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX2-5P52952 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-5P52952 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX2-5P52952 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX2-5P52952 C2orf69P4-201ENST00000565394 541 ntBASIC14.83□□□□□ -0.04
NKX2-5P52952 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-5P52952 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-5P52952 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
NKX2-5P52952 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-5P52952 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-5P52952 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-5P52952 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX2-5P52952 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-5P52952 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-5P52952 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-5P52952 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms