Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PDX1P52945 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
PDX1P52945 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.94■□□□□ 0.3
PDX1P52945 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.94■□□□□ 0.3
PDX1P52945 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PDX1P52945 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.94■□□□□ 0.3
PDX1P52945 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.94■□□□□ 0.3
PDX1P52945 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.94■□□□□ 0.3
PDX1P52945 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.94■□□□□ 0.3
PDX1P52945 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.94■□□□□ 0.3
PDX1P52945 PGM5P2-202ENST00000637225 1043 ntBASIC16.94■□□□□ 0.3
PDX1P52945 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.94■□□□□ 0.3
PDX1P52945 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.94■□□□□ 0.3
PDX1P52945 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PDX1P52945 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.94■□□□□ 0.3
PDX1P52945 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PDX1P52945 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.94■□□□□ 0.3
PDX1P52945 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PDX1P52945 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.93■□□□□ 0.3
PDX1P52945 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
PDX1P52945 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.93■□□□□ 0.3
PDX1P52945 ELK2BP-201ENST00000415014 1224 ntBASIC16.93■□□□□ 0.3
PDX1P52945 KRT18P2-201ENST00000447938 1258 ntBASIC16.93■□□□□ 0.3
PDX1P52945 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.93■□□□□ 0.3
PDX1P52945 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.93■□□□□ 0.3
PDX1P52945 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.93■□□□□ 0.3
PDX1P52945 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.93■□□□□ 0.3
PDX1P52945 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
PDX1P52945 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.93■□□□□ 0.3
PDX1P52945 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.93■□□□□ 0.3
PDX1P52945 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PDX1P52945 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.93■□□□□ 0.3
PDX1P52945 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDX1P52945 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.93■□□□□ 0.3
PDX1P52945 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 AC026471.1-201ENST00000564629 3026 ntBASIC16.93■□□□□ 0.3
PDX1P52945 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDX1P52945 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDX1P52945 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDX1P52945 AL353593.2-201ENST00000602529 1483 ntBASIC16.93■□□□□ 0.3
PDX1P52945 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PDX1P52945 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 AC148477.5-201ENST00000625164 1645 ntBASIC16.92■□□□□ 0.3
PDX1P52945 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PDX1P52945 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.92■□□□□ 0.3
PDX1P52945 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PDX1P52945 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.92■□□□□ 0.3
PDX1P52945 AL355385.1-201ENST00000606123 409 ntBASIC16.92■□□□□ 0.3
PDX1P52945 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.92■□□□□ 0.3
PDX1P52945 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.92■□□□□ 0.3
PDX1P52945 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.92■□□□□ 0.3
PDX1P52945 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.92■□□□□ 0.3
PDX1P52945 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms