Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.3■□□□□ 0.68
BRCA2P51587 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.3■□□□□ 0.68
BRCA2P51587 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCA2P51587 AL138828.2-201ENST00000615812 383 ntBASIC19.3■□□□□ 0.68
BRCA2P51587 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.3■□□□□ 0.68
BRCA2P51587 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
BRCA2P51587 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCA2P51587 AC005237.2-201ENST00000434368 219 ntBASIC19.29■□□□□ 0.68
BRCA2P51587 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.29■□□□□ 0.68
BRCA2P51587 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCA2P51587 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCA2P51587 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCA2P51587 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCA2P51587 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRCA2P51587 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRCA2P51587 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRCA2P51587 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BRCA2P51587 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCA2P51587 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCA2P51587 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCA2P51587 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCA2P51587 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRCA2P51587 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCA2P51587 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCA2P51587 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.29■□□□□ 0.68
BRCA2P51587 AL590787.1-201ENST00000568856 1315 ntBASIC19.29■□□□□ 0.68
BRCA2P51587 REXO1L11P-201ENST00000620964 1927 ntBASIC19.29■□□□□ 0.68
BRCA2P51587 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.28■□□□□ 0.68
BRCA2P51587 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.28■□□□□ 0.68
BRCA2P51587 AC106886.1-201ENST00000568660 600 ntBASIC19.28■□□□□ 0.68
BRCA2P51587 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.28■□□□□ 0.68
BRCA2P51587 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
BRCA2P51587 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.28■□□□□ 0.68
BRCA2P51587 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BRCA2P51587 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 KRT17P8-201ENST00000540749 863 ntBASIC19.28■□□□□ 0.68
BRCA2P51587 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.28■□□□□ 0.68
BRCA2P51587 MIR6787-201ENST00000616675 61 ntBASIC19.28■□□□□ 0.68
BRCA2P51587 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.28■□□□□ 0.68
BRCA2P51587 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.28■□□□□ 0.68
BRCA2P51587 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BRCA2P51587 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.28■□□□□ 0.68
BRCA2P51587 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.28■□□□□ 0.68
BRCA2P51587 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.28■□□□□ 0.68
BRCA2P51587 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCA2P51587 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.27■□□□□ 0.68
BRCA2P51587 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BRCA2P51587 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.27■□□□□ 0.68
BRCA2P51587 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.27■□□□□ 0.68
BRCA2P51587 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BRCA2P51587 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.27■□□□□ 0.68
BRCA2P51587 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 KRT8P23-201ENST00000560090 1207 ntBASIC19.27■□□□□ 0.68
BRCA2P51587 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.27■□□□□ 0.68
BRCA2P51587 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.27■□□□□ 0.68
BRCA2P51587 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCA2P51587 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.27■□□□□ 0.68
BRCA2P51587 TMEM14DP-201ENST00000422205 345 ntBASIC19.27■□□□□ 0.68
BRCA2P51587 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.27■□□□□ 0.68
BRCA2P51587 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.27■□□□□ 0.67
BRCA2P51587 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BRCA2P51587 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BRCA2P51587 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.26■□□□□ 0.67
BRCA2P51587 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.26■□□□□ 0.67
BRCA2P51587 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 AC107918.2-201ENST00000530817 355 ntBASIC19.26■□□□□ 0.67
BRCA2P51587 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BRCA2P51587 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms