Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSNK1DP48730 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1DP48730 SLC25A1P3-201ENST00000395415 828 ntBASIC17.44■□□□□ 0.38
CSNK1DP48730 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1DP48730 ELK2BP-201ENST00000415014 1224 ntBASIC17.44■□□□□ 0.38
CSNK1DP48730 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1DP48730 IGHV3-22-201ENST00000520721 359 ntBASIC17.44■□□□□ 0.38
CSNK1DP48730 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1DP48730 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1DP48730 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1DP48730 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1DP48730 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CSNK1DP48730 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1DP48730 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1DP48730 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1DP48730 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1DP48730 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1DP48730 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1DP48730 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1DP48730 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 AP002414.1-201ENST00000391405 1147 ntBASIC17.43■□□□□ 0.38
CSNK1DP48730 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1DP48730 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1DP48730 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1DP48730 AC079776.4-201ENST00000511039 504 ntBASIC17.43■□□□□ 0.38
CSNK1DP48730 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1DP48730 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.43■□□□□ 0.38
CSNK1DP48730 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1DP48730 AC005332.8-201ENST00000622750 2735 ntBASIC17.43■□□□□ 0.38
CSNK1DP48730 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CSNK1DP48730 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1DP48730 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSNK1DP48730 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1DP48730 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1DP48730 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSNK1DP48730 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.42■□□□□ 0.38
CSNK1DP48730 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 AC093525.9-201ENST00000624961 1746 ntBASIC17.42■□□□□ 0.38
CSNK1DP48730 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.42■□□□□ 0.38
CSNK1DP48730 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 PTCHD3P3-201ENST00000403073 906 ntBASIC17.42■□□□□ 0.38
CSNK1DP48730 AC098831.1-202ENST00000438821 336 ntBASIC17.42■□□□□ 0.38
CSNK1DP48730 AC092910.1-201ENST00000482027 1129 ntBASIC17.42■□□□□ 0.38
CSNK1DP48730 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.42■□□□□ 0.38
CSNK1DP48730 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.42■□□□□ 0.38
CSNK1DP48730 TERC-201ENST00000602385 541 ntBASIC17.42■□□□□ 0.38
CSNK1DP48730 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CSNK1DP48730 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 AC005593.1-201ENST00000624894 515 ntBASIC17.42■□□□□ 0.38
CSNK1DP48730 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.42■□□□□ 0.38
CSNK1DP48730 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CSNK1DP48730 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CSNK1DP48730 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1DP48730 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1DP48730 IL9RP2-201ENST00000423948 1312 ntBASIC17.42■□□□□ 0.38
CSNK1DP48730 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms