Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLP35914 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
HMGCLP35914 AC108860.2-201ENST00000562760 2183 ntBASIC17.35■□□□□ 0.37
HMGCLP35914 AC138932.1-201ENST00000534164 6830 ntBASIC17.35■□□□□ 0.37
HMGCLP35914 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.35■□□□□ 0.37
HMGCLP35914 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLP35914 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HMGCLP35914 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGCLP35914 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLP35914 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.34■□□□□ 0.37
HMGCLP35914 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGCLP35914 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLP35914 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.34■□□□□ 0.37
HMGCLP35914 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGCLP35914 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.34■□□□□ 0.37
HMGCLP35914 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLP35914 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HMGCLP35914 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCLP35914 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLP35914 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLP35914 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
HMGCLP35914 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCLP35914 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.33■□□□□ 0.37
HMGCLP35914 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGCLP35914 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGCLP35914 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HMGCLP35914 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCLP35914 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
HMGCLP35914 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCLP35914 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HMGCLP35914 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGCLP35914 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.33■□□□□ 0.37
HMGCLP35914 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HMGCLP35914 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
HMGCLP35914 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCLP35914 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCLP35914 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCLP35914 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
HMGCLP35914 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCLP35914 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HMGCLP35914 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCLP35914 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCLP35914 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCLP35914 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCLP35914 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
HMGCLP35914 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCLP35914 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCLP35914 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCLP35914 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCLP35914 AC097637.2-201ENST00000624096 1997 ntBASIC17.33■□□□□ 0.36
HMGCLP35914 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HMGCLP35914 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
HMGCLP35914 AC093525.9-201ENST00000624961 1746 ntBASIC17.33■□□□□ 0.36
HMGCLP35914 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMGCLP35914 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCLP35914 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCLP35914 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGCLP35914 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCLP35914 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCLP35914 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCLP35914 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGCLP35914 MTDHP4-201ENST00000600287 670 ntBASIC17.32■□□□□ 0.36
HMGCLP35914 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HMGCLP35914 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms