Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA10P31260 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA10P31260 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA10P31260 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA10P31260 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA10P31260 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA10P31260 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 KLF2P3-201ENST00000451977 1087 ntBASIC21.11■□□□□ 0.97
HOXA10P31260 KRT8P23-201ENST00000560090 1207 ntBASIC21.11■□□□□ 0.97
HOXA10P31260 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.11■□□□□ 0.97
HOXA10P31260 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.11■□□□□ 0.97
HOXA10P31260 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.11■□□□□ 0.97
HOXA10P31260 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA10P31260 AC090164.3-201ENST00000610780 2143 ntBASIC21.11■□□□□ 0.97
HOXA10P31260 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA10P31260 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HOXA10P31260 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA10P31260 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.1■□□□□ 0.97
HOXA10P31260 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
HOXA10P31260 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HOXA10P31260 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.1■□□□□ 0.97
HOXA10P31260 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HOXA10P31260 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.1■□□□□ 0.97
HOXA10P31260 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.1■□□□□ 0.97
HOXA10P31260 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HOXA10P31260 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 MIR661-201ENST00000384842 89 ntBASIC21.1■□□□□ 0.97
HOXA10P31260 BASP1P1-201ENST00000430708 665 ntBASIC21.1■□□□□ 0.97
HOXA10P31260 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.1■□□□□ 0.97
HOXA10P31260 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.1■□□□□ 0.97
HOXA10P31260 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HOXA10P31260 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.1■□□□□ 0.97
HOXA10P31260 AL009183.1-201ENST00000603760 355 ntBASIC21.1■□□□□ 0.97
HOXA10P31260 AF228730.6-201ENST00000641497 218 ntBASIC21.1■□□□□ 0.97
HOXA10P31260 AC084121.3-201ENST00000641716 218 ntBASIC21.1■□□□□ 0.97
HOXA10P31260 AC105233.6-201ENST00000642093 218 ntBASIC21.1■□□□□ 0.97
HOXA10P31260 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HOXA10P31260 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HOXA10P31260 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA10P31260 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.1■□□□□ 0.97
HOXA10P31260 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXA10P31260 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.09■□□□□ 0.97
HOXA10P31260 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
HOXA10P31260 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HOXA10P31260 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HOXA10P31260 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXA10P31260 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.09■□□□□ 0.97
HOXA10P31260 MIR943-201ENST00000401286 94 ntBASIC21.09■□□□□ 0.97
HOXA10P31260 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXA10P31260 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXA10P31260 RBPMS2P1-201ENST00000437762 623 ntBASIC21.09■□□□□ 0.97
HOXA10P31260 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.09■□□□□ 0.97
HOXA10P31260 AC109635.5-201ENST00000533593 962 ntBASIC21.09■□□□□ 0.97
HOXA10P31260 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.09■□□□□ 0.97
HOXA10P31260 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.09■□□□□ 0.97
HOXA10P31260 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXA10P31260 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXA10P31260 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
HOXA10P31260 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.09■□□□□ 0.97
HOXA10P31260 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HOXA10P31260 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA10P31260 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HOXA10P31260 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXA10P31260 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXA10P31260 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXA10P31260 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.08■□□□□ 0.97
HOXA10P31260 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXA10P31260 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HOXA10P31260 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXA10P31260 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms