Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.17■□□□□ 0.18
LCN1P31025 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LCN1P31025 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.17■□□□□ 0.18
LCN1P31025 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.17■□□□□ 0.18
LCN1P31025 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LCN1P31025 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.17■□□□□ 0.18
LCN1P31025 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.17■□□□□ 0.18
LCN1P31025 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.17■□□□□ 0.18
LCN1P31025 AC093458.2-201ENST00000623150 629 ntBASIC16.17■□□□□ 0.18
LCN1P31025 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LCN1P31025 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LCN1P31025 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.17■□□□□ 0.18
LCN1P31025 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P31025 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P31025 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P31025 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
LCN1P31025 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.16■□□□□ 0.18
LCN1P31025 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P31025 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P31025 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.16■□□□□ 0.18
LCN1P31025 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.16■□□□□ 0.18
LCN1P31025 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P31025 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.16■□□□□ 0.18
LCN1P31025 AC096582.2-201ENST00000510860 516 ntBASIC16.16■□□□□ 0.18
LCN1P31025 AC109462.3-201ENST00000573934 613 ntBASIC16.16■□□□□ 0.18
LCN1P31025 AD001527.2-201ENST00000622994 785 ntBASIC16.16■□□□□ 0.18
LCN1P31025 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LCN1P31025 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LCN1P31025 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P31025 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P31025 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.16■□□□□ 0.18
LCN1P31025 AL139384.1-201ENST00000612143 3047 ntBASIC16.16■□□□□ 0.18
LCN1P31025 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P31025 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LCN1P31025 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.16■□□□□ 0.18
LCN1P31025 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
LCN1P31025 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LCN1P31025 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.15■□□□□ 0.18
LCN1P31025 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
LCN1P31025 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.15■□□□□ 0.18
LCN1P31025 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LCN1P31025 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 AC003669.1-201ENST00000334569 611 ntBASIC16.15■□□□□ 0.18
LCN1P31025 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.15■□□□□ 0.18
LCN1P31025 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.15■□□□□ 0.18
LCN1P31025 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.15■□□□□ 0.18
LCN1P31025 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
LCN1P31025 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.15■□□□□ 0.18
LCN1P31025 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCN1P31025 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.15■□□□□ 0.18
LCN1P31025 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.15■□□□□ 0.18
LCN1P31025 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms