Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.8■□□□□ 0.76
CNGA1P29973 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.8■□□□□ 0.76
CNGA1P29973 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CNGA1P29973 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.8■□□□□ 0.76
CNGA1P29973 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 IGLL3P-201ENST00000412472 434 ntBASIC19.8■□□□□ 0.76
CNGA1P29973 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.8■□□□□ 0.76
CNGA1P29973 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.8■□□□□ 0.76
CNGA1P29973 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.8■□□□□ 0.76
CNGA1P29973 PDPK2P-202ENST00000562415 1191 ntBASIC19.8■□□□□ 0.76
CNGA1P29973 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.8■□□□□ 0.76
CNGA1P29973 AC010507.1-201ENST00000633895 436 ntBASIC19.8■□□□□ 0.76
CNGA1P29973 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CNGA1P29973 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.8■□□□□ 0.76
CNGA1P29973 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.8■□□□□ 0.76
CNGA1P29973 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CNGA1P29973 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CNGA1P29973 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CNGA1P29973 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.79■□□□□ 0.76
CNGA1P29973 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CNGA1P29973 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CNGA1P29973 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 AC003669.1-201ENST00000334569 611 ntBASIC19.79■□□□□ 0.76
CNGA1P29973 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.79■□□□□ 0.76
CNGA1P29973 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.79■□□□□ 0.76
CNGA1P29973 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.79■□□□□ 0.76
CNGA1P29973 TSEN15P1-201ENST00000423257 515 ntBASIC19.79■□□□□ 0.76
CNGA1P29973 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CNGA1P29973 FAM58CP-201ENST00000435741 640 ntBASIC19.79■□□□□ 0.76
CNGA1P29973 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.79■□□□□ 0.76
CNGA1P29973 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.79■□□□□ 0.76
CNGA1P29973 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CNGA1P29973 AC004449.1-201ENST00000564240 433 ntBASIC19.79■□□□□ 0.76
CNGA1P29973 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CNGA1P29973 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CNGA1P29973 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.79■□□□□ 0.76
CNGA1P29973 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.79■□□□□ 0.76
CNGA1P29973 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CNGA1P29973 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.79■□□□□ 0.76
CNGA1P29973 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNGA1P29973 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.78■□□□□ 0.76
CNGA1P29973 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.78■□□□□ 0.76
CNGA1P29973 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 AL390961.4-201ENST00000623958 2535 ntBASIC19.78■□□□□ 0.76
CNGA1P29973 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.78■□□□□ 0.76
CNGA1P29973 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.78■□□□□ 0.76
CNGA1P29973 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
CNGA1P29973 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.78■□□□□ 0.76
CNGA1P29973 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CNGA1P29973 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 KRT19P2-202ENST00000557173 1012 ntBASIC19.78■□□□□ 0.76
CNGA1P29973 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.78■□□□□ 0.76
CNGA1P29973 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.78■□□□□ 0.76
CNGA1P29973 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms