Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
COL5A2P05997 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.69■■□□□ 1.22
COL5A2P05997 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL5A2P05997 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
COL5A2P05997 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
COL5A2P05997 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.68■■□□□ 1.22
COL5A2P05997 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
COL5A2P05997 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC22.68■■□□□ 1.22
COL5A2P05997 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.68■■□□□ 1.22
COL5A2P05997 COX5BP8-201ENST00000416911 349 ntBASIC22.68■■□□□ 1.22
COL5A2P05997 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC22.68■■□□□ 1.22
COL5A2P05997 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.68■■□□□ 1.22
COL5A2P05997 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC22.68■■□□□ 1.22
COL5A2P05997 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC22.68■■□□□ 1.22
COL5A2P05997 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.68■■□□□ 1.22
COL5A2P05997 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL5A2P05997 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
COL5A2P05997 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 OR8S1-201ENST00000310194 1080 ntBASIC22.67■■□□□ 1.22
COL5A2P05997 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
COL5A2P05997 TSSK5P-201ENST00000423978 907 ntBASIC22.67■■□□□ 1.22
COL5A2P05997 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC22.67■■□□□ 1.22
COL5A2P05997 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC22.67■■□□□ 1.22
COL5A2P05997 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
COL5A2P05997 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC22.67■■□□□ 1.22
COL5A2P05997 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.67■■□□□ 1.22
COL5A2P05997 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 FLJ13224-201ENST00000313737 1514 ntBASIC22.67■■□□□ 1.22
COL5A2P05997 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC22.67■■□□□ 1.22
COL5A2P05997 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC22.67■■□□□ 1.22
COL5A2P05997 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL5A2P05997 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
COL5A2P05997 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
COL5A2P05997 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC22.66■■□□□ 1.22
COL5A2P05997 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC22.66■■□□□ 1.22
COL5A2P05997 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.66■■□□□ 1.22
COL5A2P05997 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC22.66■■□□□ 1.22
COL5A2P05997 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.66■■□□□ 1.22
COL5A2P05997 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.66■■□□□ 1.22
COL5A2P05997 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.66■■□□□ 1.22
COL5A2P05997 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
COL5A2P05997 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.66■■□□□ 1.22
COL5A2P05997 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.66■■□□□ 1.22
COL5A2P05997 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.66■■□□□ 1.22
COL5A2P05997 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC22.66■■□□□ 1.22
COL5A2P05997 AC012569.1-201ENST00000591191 1524 ntBASIC22.66■■□□□ 1.22
COL5A2P05997 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC22.66■■□□□ 1.22
COL5A2P05997 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL5A2P05997 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC22.66■■□□□ 1.22
COL5A2P05997 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC22.66■■□□□ 1.22
COL5A2P05997 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC22.66■■□□□ 1.22
COL5A2P05997 NAA50-208ENST00000497255 789 ntTSL 5 BASIC22.66■■□□□ 1.22
COL5A2P05997 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
COL5A2P05997 COQ6-210ENST00000554920 649 ntTSL 3 BASIC22.66■■□□□ 1.22
COL5A2P05997 AC008267.7-201ENST00000624570 1194 ntBASIC22.66■■□□□ 1.22
COL5A2P05997 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
COL5A2P05997 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL5A2P05997 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
COL5A2P05997 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL5A2P05997 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL5A2P05997 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL5A2P05997 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL5A2P05997 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL5A2P05997 CALY-202ENST00000368555 783 ntTSL 2 BASIC22.65■■□□□ 1.22
COL5A2P05997 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC22.65■■□□□ 1.22
COL5A2P05997 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC22.65■■□□□ 1.22
COL5A2P05997 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC22.65■■□□□ 1.22
COL5A2P05997 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC22.65■■□□□ 1.22
COL5A2P05997 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL5A2P05997 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
COL5A2P05997 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
COL5A2P05997 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL5A2P05997 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.64■■□□□ 1.22
COL5A2P05997 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms