Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNA1P02708 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.86■□□□□ 0.61
CHRNA1P02708 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.86■□□□□ 0.61
CHRNA1P02708 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.86■□□□□ 0.61
CHRNA1P02708 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.86■□□□□ 0.61
CHRNA1P02708 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.86■□□□□ 0.61
CHRNA1P02708 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHRNA1P02708 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNA1P02708 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA1P02708 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA1P02708 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHRNA1P02708 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA1P02708 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA1P02708 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA1P02708 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA1P02708 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA1P02708 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA1P02708 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.85■□□□□ 0.61
CHRNA1P02708 TSEN15P1-201ENST00000423257 515 ntBASIC18.85■□□□□ 0.61
CHRNA1P02708 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA1P02708 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHRNA1P02708 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA1P02708 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.85■□□□□ 0.61
CHRNA1P02708 AC106028.4-201ENST00000614509 607 ntBASIC18.85■□□□□ 0.61
CHRNA1P02708 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA1P02708 REXO1L3P-201ENST00000622202 1288 ntBASIC18.85■□□□□ 0.61
CHRNA1P02708 AC093028.1-201ENST00000622998 982 ntBASIC18.85■□□□□ 0.61
CHRNA1P02708 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA1P02708 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA1P02708 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA1P02708 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA1P02708 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA1P02708 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA1P02708 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA1P02708 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA1P02708 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRNA1P02708 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CHRNA1P02708 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.84■□□□□ 0.61
CHRNA1P02708 AC129492.6-201ENST00000611383 1305 ntBASIC18.84■□□□□ 0.61
CHRNA1P02708 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHRNA1P02708 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.84■□□□□ 0.61
CHRNA1P02708 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.84■□□□□ 0.61
CHRNA1P02708 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.84■□□□□ 0.61
CHRNA1P02708 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRNA1P02708 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
CHRNA1P02708 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
CHRNA1P02708 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.84■□□□□ 0.61
CHRNA1P02708 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.84■□□□□ 0.61
CHRNA1P02708 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.84■□□□□ 0.61
CHRNA1P02708 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 AC004835.2-201ENST00000603762 682 ntBASIC18.84■□□□□ 0.61
CHRNA1P02708 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.84■□□□□ 0.61
CHRNA1P02708 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
CHRNA1P02708 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 AL121761.2-201ENST00000598007 1648 ntBASIC18.84■□□□□ 0.61
CHRNA1P02708 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.84■□□□□ 0.61
CHRNA1P02708 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 LINC00304-203ENST00000565008 1864 ntBASIC18.84■□□□□ 0.61
CHRNA1P02708 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA1P02708 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHRNA1P02708 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.83■□□□□ 0.61
CHRNA1P02708 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA1P02708 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA1P02708 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CHRNA1P02708 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.83■□□□□ 0.61
CHRNA1P02708 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA1P02708 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA1P02708 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA1P02708 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA1P02708 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA1P02708 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.83■□□□□ 0.6
CHRNA1P02708 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.83■□□□□ 0.6
CHRNA1P02708 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.83■□□□□ 0.6
CHRNA1P02708 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA1P02708 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA1P02708 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA1P02708 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms