Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQA2P01906 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.71■□□□□ 0.1
HLA-DQA2P01906 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DQA2P01906 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DQA2P01906 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DQA2P01906 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DQA2P01906 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 LINC01311-201ENST00000565162 1445 ntBASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AC073508.3-201ENST00000619697 1419 ntBASIC15.7■□□□□ 0.1
HLA-DQA2P01906 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 HBZP1-201ENST00000354915 429 ntBASIC15.7■□□□□ 0.1
HLA-DQA2P01906 MIR662-201ENST00000384847 95 ntBASIC15.7■□□□□ 0.1
HLA-DQA2P01906 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AC211429.1-201ENST00000415277 523 ntBASIC15.7■□□□□ 0.1
HLA-DQA2P01906 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 MTCL1P1-201ENST00000446207 792 ntBASIC15.7■□□□□ 0.1
HLA-DQA2P01906 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 LINC01023-201ENST00000606054 436 ntBASIC15.7■□□□□ 0.1
HLA-DQA2P01906 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DQA2P01906 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 AD000864.1-201ENST00000624076 2295 ntBASIC15.69■□□□□ 0.1
HLA-DQA2P01906 AC068587.6-202ENST00000641839 5619 ntBASIC15.69■□□□□ 0.1
HLA-DQA2P01906 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 AC009053.2-201ENST00000563701 2365 ntBASIC15.69■□□□□ 0.1
HLA-DQA2P01906 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 KRT18P38-201ENST00000449496 1282 ntBASIC15.69■□□□□ 0.1
HLA-DQA2P01906 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 AC005332.3-201ENST00000589904 676 ntBASIC15.69■□□□□ 0.1
HLA-DQA2P01906 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DQA2P01906 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.68■□□□□ 0.1
HLA-DQA2P01906 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms