Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
MT-CO1P00395 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.9■□□□□ 0.46
MT-CO1P00395 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.9■□□□□ 0.46
MT-CO1P00395 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.9■□□□□ 0.46
MT-CO1P00395 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MT-CO1P00395 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.9■□□□□ 0.46
MT-CO1P00395 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.9■□□□□ 0.46
MT-CO1P00395 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
MT-CO1P00395 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
MT-CO1P00395 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MT-CO1P00395 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.9■□□□□ 0.46
MT-CO1P00395 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
MT-CO1P00395 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
MT-CO1P00395 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MT-CO1P00395 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
MT-CO1P00395 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO1P00395 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.89■□□□□ 0.45
MT-CO1P00395 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO1P00395 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 AC006116.8-202ENST00000587620 1550 ntBASIC17.89■□□□□ 0.45
MT-CO1P00395 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO1P00395 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.89■□□□□ 0.45
MT-CO1P00395 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO1P00395 AC018712.1-201ENST00000455767 687 ntBASIC17.89■□□□□ 0.45
MT-CO1P00395 SCARNA2-201ENST00000458748 420 ntBASIC17.89■□□□□ 0.45
MT-CO1P00395 BX005266.1-201ENST00000473402 457 ntBASIC17.89■□□□□ 0.45
MT-CO1P00395 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 AC079776.4-201ENST00000511039 504 ntBASIC17.89■□□□□ 0.45
MT-CO1P00395 AL662844.1-201ENST00000546340 181 ntBASIC17.89■□□□□ 0.45
MT-CO1P00395 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MT-CO1P00395 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.89■□□□□ 0.45
MT-CO1P00395 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 AC079776.2-201ENST00000641154 1609 ntBASIC17.89■□□□□ 0.45
MT-CO1P00395 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
MT-CO1P00395 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
MT-CO1P00395 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO1P00395 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO1P00395 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.89■□□□□ 0.45
MT-CO1P00395 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MT-CO1P00395 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
MT-CO1P00395 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
MT-CO1P00395 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
MT-CO1P00395 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-CO1P00395 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.88■□□□□ 0.45
MT-CO1P00395 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-CO1P00395 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.88■□□□□ 0.45
MT-CO1P00395 AF186996.4-201ENST00000467186 377 ntBASIC17.88■□□□□ 0.45
MT-CO1P00395 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.88■□□□□ 0.45
MT-CO1P00395 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.88■□□□□ 0.45
MT-CO1P00395 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.88■□□□□ 0.45
MT-CO1P00395 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 LINC00896-202ENST00000609602 2128 ntBASIC17.88■□□□□ 0.45
MT-CO1P00395 AL773604.1-201ENST00000617417 272 ntBASIC17.88■□□□□ 0.45
MT-CO1P00395 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
MT-CO1P00395 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-CO1P00395 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.88■□□□□ 0.45
MT-CO1P00395 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MT-CO1P00395 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-CO1P00395 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO1P00395 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
MT-CO1P00395 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.88■□□□□ 0.45
MT-CO1P00395 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms