Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRUB2O95900 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB2O95900 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
TRUB2O95900 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRUB2O95900 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.27■□□□□ 0.52
TRUB2O95900 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRUB2O95900 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB2O95900 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB2O95900 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB2O95900 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB2O95900 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRUB2O95900 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRUB2O95900 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB2O95900 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB2O95900 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB2O95900 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
TRUB2O95900 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.27■□□□□ 0.52
TRUB2O95900 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRUB2O95900 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.27■□□□□ 0.52
TRUB2O95900 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.27■□□□□ 0.52
TRUB2O95900 STK25P1-201ENST00000585406 838 ntBASIC18.27■□□□□ 0.52
TRUB2O95900 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.27■□□□□ 0.52
TRUB2O95900 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.27■□□□□ 0.52
TRUB2O95900 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TRUB2O95900 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRUB2O95900 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRUB2O95900 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRUB2O95900 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRUB2O95900 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRUB2O95900 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRUB2O95900 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.26■□□□□ 0.51
TRUB2O95900 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRUB2O95900 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 AC080080.1-201ENST00000625121 2420 ntBASIC18.26■□□□□ 0.51
TRUB2O95900 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
TRUB2O95900 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.26■□□□□ 0.51
TRUB2O95900 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.26■□□□□ 0.51
TRUB2O95900 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.26■□□□□ 0.51
TRUB2O95900 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.26■□□□□ 0.51
TRUB2O95900 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.26■□□□□ 0.51
TRUB2O95900 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.26■□□□□ 0.51
TRUB2O95900 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.26■□□□□ 0.51
TRUB2O95900 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.26■□□□□ 0.51
TRUB2O95900 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.26■□□□□ 0.51
TRUB2O95900 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRUB2O95900 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRUB2O95900 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
TRUB2O95900 AC012313.1-201ENST00000593393 3059 ntBASIC18.26■□□□□ 0.51
TRUB2O95900 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.26■□□□□ 0.51
TRUB2O95900 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.26■□□□□ 0.51
TRUB2O95900 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB2O95900 AC106820.2-201ENST00000563775 3264 ntBASIC18.25■□□□□ 0.51
TRUB2O95900 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRUB2O95900 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRUB2O95900 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.25■□□□□ 0.51
TRUB2O95900 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.25■□□□□ 0.51
TRUB2O95900 AC003669.1-201ENST00000334569 611 ntBASIC18.25■□□□□ 0.51
TRUB2O95900 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 KLF4P1-201ENST00000412782 1185 ntBASIC18.25■□□□□ 0.51
TRUB2O95900 TPM4P1-201ENST00000436100 807 ntBASIC18.25■□□□□ 0.51
TRUB2O95900 FAAHP1-202ENST00000446499 1238 ntBASIC18.25■□□□□ 0.51
TRUB2O95900 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.25■□□□□ 0.51
TRUB2O95900 FGFR3P6-201ENST00000457012 610 ntBASIC18.25■□□□□ 0.51
TRUB2O95900 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.25■□□□□ 0.51
TRUB2O95900 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.25■□□□□ 0.51
TRUB2O95900 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.25■□□□□ 0.51
TRUB2O95900 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.25■□□□□ 0.51
TRUB2O95900 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.25■□□□□ 0.51
TRUB2O95900 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.25■□□□□ 0.51
TRUB2O95900 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.25■□□□□ 0.51
TRUB2O95900 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRUB2O95900 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
TRUB2O95900 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB2O95900 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
TRUB2O95900 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.25■□□□□ 0.51
TRUB2O95900 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRUB2O95900 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms