Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.9■□□□□ 0.62
EXTL3O43909 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.9■□□□□ 0.62
EXTL3O43909 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 AC141586.5-201ENST00000624546 2050 ntBASIC18.9■□□□□ 0.62
EXTL3O43909 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.9■□□□□ 0.62
EXTL3O43909 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
EXTL3O43909 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.9■□□□□ 0.62
EXTL3O43909 FAM197Y8-203ENST00000450145 560 ntBASIC18.9■□□□□ 0.62
EXTL3O43909 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.9■□□□□ 0.62
EXTL3O43909 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.9■□□□□ 0.62
EXTL3O43909 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.9■□□□□ 0.62
EXTL3O43909 AC025062.2-201ENST00000605477 670 ntBASIC18.9■□□□□ 0.62
EXTL3O43909 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.9■□□□□ 0.62
EXTL3O43909 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.9■□□□□ 0.62
EXTL3O43909 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
EXTL3O43909 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.9■□□□□ 0.62
EXTL3O43909 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.9■□□□□ 0.62
EXTL3O43909 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.9■□□□□ 0.62
EXTL3O43909 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXTL3O43909 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EXTL3O43909 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.89■□□□□ 0.62
EXTL3O43909 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.89■□□□□ 0.62
EXTL3O43909 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
EXTL3O43909 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EXTL3O43909 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
EXTL3O43909 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EXTL3O43909 RNPS1P1-201ENST00000507437 918 ntBASIC18.89■□□□□ 0.61
EXTL3O43909 AC073648.2-201ENST00000510116 352 ntBASIC18.89■□□□□ 0.61
EXTL3O43909 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.89■□□□□ 0.61
EXTL3O43909 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
EXTL3O43909 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.89■□□□□ 0.61
EXTL3O43909 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.89■□□□□ 0.61
EXTL3O43909 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.89■□□□□ 0.61
EXTL3O43909 AP002469.2-201ENST00000531724 424 ntBASIC18.89■□□□□ 0.61
EXTL3O43909 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.89■□□□□ 0.61
EXTL3O43909 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.89■□□□□ 0.61
EXTL3O43909 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.89■□□□□ 0.61
EXTL3O43909 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
EXTL3O43909 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EXTL3O43909 AC097637.2-201ENST00000624096 1997 ntBASIC18.89■□□□□ 0.61
EXTL3O43909 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.89■□□□□ 0.61
EXTL3O43909 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EXTL3O43909 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
EXTL3O43909 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EXTL3O43909 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EXTL3O43909 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EXTL3O43909 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
EXTL3O43909 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EXTL3O43909 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
EXTL3O43909 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
EXTL3O43909 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.88■□□□□ 0.61
EXTL3O43909 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.88■□□□□ 0.61
EXTL3O43909 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.88■□□□□ 0.61
EXTL3O43909 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.88■□□□□ 0.61
EXTL3O43909 AC064862.7-201ENST00000604520 867 ntBASIC18.88■□□□□ 0.61
EXTL3O43909 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.88■□□□□ 0.61
EXTL3O43909 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EXTL3O43909 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms