Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHF1O43189 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.13■□□□□ 0.01
PHF1O43189 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHF1O43189 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.13■□□□□ 0.01
PHF1O43189 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHF1O43189 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHF1O43189 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.12■□□□□ 0.01
PHF1O43189 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PHF1O43189 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.12■□□□□ 0.01
PHF1O43189 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PHF1O43189 PHGDH-209ENST00000641074 1780 ntBASIC15.12■□□□□ 0.01
PHF1O43189 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PHF1O43189 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.12■□□□□ 0.01
PHF1O43189 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.12■□□□□ 0.01
PHF1O43189 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.12■□□□□ 0.01
PHF1O43189 SLC25A1P1-201ENST00000528351 927 ntBASIC15.12■□□□□ 0.01
PHF1O43189 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PHF1O43189 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.12■□□□□ 0.01
PHF1O43189 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.12■□□□□ 0.01
PHF1O43189 AC074051.2-201ENST00000565115 352 ntBASIC15.12■□□□□ 0.01
PHF1O43189 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.12■□□□□ 0.01
PHF1O43189 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.12■□□□□ 0.01
PHF1O43189 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PHF1O43189 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.12■□□□□ 0.01
PHF1O43189 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.12■□□□□ 0.01
PHF1O43189 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
PHF1O43189 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHF1O43189 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
PHF1O43189 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 AL353692.3-201ENST00000407031 1396 ntBASIC15.11■□□□□ 0.01
PHF1O43189 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PHF1O43189 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.11■□□□□ 0.01
PHF1O43189 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.11■□□□□ 0.01
PHF1O43189 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 LINC02084-201ENST00000606069 1096 ntBASIC15.11■□□□□ 0.01
PHF1O43189 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.11■□□□□ 0.01
PHF1O43189 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PHF1O43189 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHF1O43189 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.1■□□□□ 0.01
PHF1O43189 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHF1O43189 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.1■□□□□ 0.01
PHF1O43189 AC141586.5-201ENST00000624546 2050 ntBASIC15.1■□□□□ 0.01
PHF1O43189 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHF1O43189 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PHF1O43189 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.1■□□□□ 0.01
PHF1O43189 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PHF1O43189 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHF1O43189 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHF1O43189 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHF1O43189 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHF1O43189 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHF1O43189 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PHF1O43189 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
PHF1O43189 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PHF1O43189 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.1■□□□□ 0.01
PHF1O43189 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHF1O43189 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.1■□□□□ 0.01
PHF1O43189 BX842568.4-201ENST00000421222 227 ntBASIC15.1■□□□□ 0.01
PHF1O43189 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.1■□□□□ 0.01
PHF1O43189 HMGN1P19-201ENST00000436976 333 ntBASIC15.1■□□□□ 0.01
PHF1O43189 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.1■□□□□ 0.01
PHF1O43189 POLD2P1-201ENST00000511220 997 ntBASIC15.1■□□□□ 0.01
PHF1O43189 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms