Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPTBN2O15020 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.46■□□□□ 0.23
SPTBN2O15020 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPTBN2O15020 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.46■□□□□ 0.23
SPTBN2O15020 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SPTBN2O15020 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.46■□□□□ 0.23
SPTBN2O15020 ANKRD19P-201ENST00000338192 862 ntBASIC16.46■□□□□ 0.23
SPTBN2O15020 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.46■□□□□ 0.23
SPTBN2O15020 RNA5SP423-201ENST00000517127 109 ntBASIC16.46■□□□□ 0.23
SPTBN2O15020 AC109462.3-201ENST00000573934 613 ntBASIC16.46■□□□□ 0.23
SPTBN2O15020 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPTBN2O15020 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPTBN2O15020 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPTBN2O15020 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPTBN2O15020 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SPTBN2O15020 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SPTBN2O15020 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SPTBN2O15020 WASH6P-202ENST00000359512 1437 ntBASIC16.46■□□□□ 0.22
SPTBN2O15020 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPTBN2O15020 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.46■□□□□ 0.22
SPTBN2O15020 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPTBN2O15020 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SPTBN2O15020 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SPTBN2O15020 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SPTBN2O15020 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SPTBN2O15020 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.45■□□□□ 0.22
SPTBN2O15020 CHCHD2P3-201ENST00000603038 451 ntBASIC16.45■□□□□ 0.22
SPTBN2O15020 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.45■□□□□ 0.22
SPTBN2O15020 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.45■□□□□ 0.22
SPTBN2O15020 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.45■□□□□ 0.22
SPTBN2O15020 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
SPTBN2O15020 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SPTBN2O15020 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SPTBN2O15020 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.45■□□□□ 0.22
SPTBN2O15020 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.45■□□□□ 0.22
SPTBN2O15020 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SPTBN2O15020 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SPTBN2O15020 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPTBN2O15020 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.44■□□□□ 0.22
SPTBN2O15020 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.44■□□□□ 0.22
SPTBN2O15020 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.44■□□□□ 0.22
SPTBN2O15020 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 AC009407.1-201ENST00000568958 598 ntBASIC16.44■□□□□ 0.22
SPTBN2O15020 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.44■□□□□ 0.22
SPTBN2O15020 AC129492.6-201ENST00000611383 1305 ntBASIC16.44■□□□□ 0.22
SPTBN2O15020 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SPTBN2O15020 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.44■□□□□ 0.22
SPTBN2O15020 AC093677.2-201ENST00000600169 1863 ntBASIC16.44■□□□□ 0.22
SPTBN2O15020 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.44■□□□□ 0.22
SPTBN2O15020 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.44■□□□□ 0.22
SPTBN2O15020 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.44■□□□□ 0.22
SPTBN2O15020 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SPTBN2O15020 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SPTBN2O15020 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.44■□□□□ 0.22
SPTBN2O15020 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.44■□□□□ 0.22
SPTBN2O15020 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SPTBN2O15020 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.44■□□□□ 0.22
SPTBN2O15020 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 AL139099.5-201ENST00000635274 300 ntBASIC16.44■□□□□ 0.22
SPTBN2O15020 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SPTBN2O15020 KRT8P44-201ENST00000441609 1350 ntBASIC16.44■□□□□ 0.22
SPTBN2O15020 AL391825.1-201ENST00000457671 1364 ntBASIC16.44■□□□□ 0.22
SPTBN2O15020 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.44■□□□□ 0.22
SPTBN2O15020 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPTBN2O15020 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.43■□□□□ 0.22
SPTBN2O15020 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.43■□□□□ 0.22
SPTBN2O15020 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPTBN2O15020 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms