Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.55■□□□□ 0.24
UPK1AO00322 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 AC011840.4-201ENST00000578471 627 ntBASIC16.55■□□□□ 0.24
UPK1AO00322 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.55■□□□□ 0.24
UPK1AO00322 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
UPK1AO00322 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.55■□□□□ 0.24
UPK1AO00322 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
UPK1AO00322 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UPK1AO00322 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
UPK1AO00322 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.54■□□□□ 0.24
UPK1AO00322 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
UPK1AO00322 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.54■□□□□ 0.24
UPK1AO00322 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.54■□□□□ 0.24
UPK1AO00322 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.54■□□□□ 0.24
UPK1AO00322 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 AL445228.2-201ENST00000605589 952 ntBASIC16.54■□□□□ 0.24
UPK1AO00322 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.54■□□□□ 0.24
UPK1AO00322 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.54■□□□□ 0.24
UPK1AO00322 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1AO00322 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UPK1AO00322 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UPK1AO00322 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
UPK1AO00322 AC125634.1-201ENST00000438758 1403 ntBASIC16.53■□□□□ 0.24
UPK1AO00322 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UPK1AO00322 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
UPK1AO00322 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK1AO00322 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
UPK1AO00322 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 TSSC2-201ENST00000450217 709 ntBASIC16.53■□□□□ 0.24
UPK1AO00322 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK1AO00322 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.53■□□□□ 0.24
UPK1AO00322 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 AC005336.2-201ENST00000593183 939 ntBASIC16.53■□□□□ 0.24
UPK1AO00322 AC010331.1-201ENST00000611423 582 ntBASIC16.53■□□□□ 0.24
UPK1AO00322 AL358472.4-201ENST00000633140 710 ntBASIC16.53■□□□□ 0.24
UPK1AO00322 AP000550.4-202ENST00000639755 178 ntBASIC16.53■□□□□ 0.24
UPK1AO00322 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms