Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDC7O00311 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDC7O00311 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC7O00311 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.13■□□□□ 0.33
CDC7O00311 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDC7O00311 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDC7O00311 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDC7O00311 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC7O00311 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC7O00311 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.12■□□□□ 0.33
CDC7O00311 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDC7O00311 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDC7O00311 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDC7O00311 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC7O00311 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDC7O00311 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDC7O00311 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDC7O00311 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC7O00311 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.12■□□□□ 0.33
CDC7O00311 AC111152.3-201ENST00000569699 673 ntBASIC17.12■□□□□ 0.33
CDC7O00311 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.12■□□□□ 0.33
CDC7O00311 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDC7O00311 AC011467.2-201ENST00000598425 242 ntBASIC17.12■□□□□ 0.33
CDC7O00311 AP000550.4-202ENST00000639755 178 ntBASIC17.12■□□□□ 0.33
CDC7O00311 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC7O00311 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC7O00311 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC7O00311 TP73-AS1-210ENST00000637775 1455 ntBASIC17.12■□□□□ 0.33
CDC7O00311 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC7O00311 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC7O00311 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC7O00311 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDC7O00311 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC7O00311 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC7O00311 LINC00265-3P-201ENST00000447588 903 ntBASIC17.11■□□□□ 0.33
CDC7O00311 KRT17P6-201ENST00000453795 1220 ntBASIC17.11■□□□□ 0.33
CDC7O00311 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC7O00311 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC7O00311 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC7O00311 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC7O00311 MIR3180-1-201ENST00000580374 94 ntBASIC17.11■□□□□ 0.33
CDC7O00311 MIR3180-3-201ENST00000584616 94 ntBASIC17.11■□□□□ 0.33
CDC7O00311 STK25P1-201ENST00000585406 838 ntBASIC17.11■□□□□ 0.33
CDC7O00311 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC7O00311 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC7O00311 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDC7O00311 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC7O00311 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CDC7O00311 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC7O00311 PKD1P1-201ENST00000458669 6805 ntBASIC17.11■□□□□ 0.33
CDC7O00311 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.11■□□□□ 0.33
CDC7O00311 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC7O00311 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDC7O00311 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 AC093525.9-201ENST00000624961 1746 ntBASIC17.1■□□□□ 0.33
CDC7O00311 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDC7O00311 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC7O00311 MIR1224-201ENST00000408193 85 ntBASIC17.1■□□□□ 0.33
CDC7O00311 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC7O00311 MINOS1P3-201ENST00000457048 203 ntBASIC17.1■□□□□ 0.33
CDC7O00311 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC7O00311 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDC7O00311 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms