Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.06□□□□□ -0.16
SRRM4A7MD48 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 AC246785.2-201ENST00000432512 513 ntBASIC14.06□□□□□ -0.16
SRRM4A7MD48 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 IGHV3-52-201ENST00000519770 353 ntBASIC14.06□□□□□ -0.16
SRRM4A7MD48 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 AP005901.3-202ENST00000581653 237 ntBASIC14.06□□□□□ -0.16
SRRM4A7MD48 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.06□□□□□ -0.16
SRRM4A7MD48 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 KRT8P10-201ENST00000450021 1447 ntBASIC14.06□□□□□ -0.16
SRRM4A7MD48 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 AC060834.1-201ENST00000443027 2032 ntBASIC14.05□□□□□ -0.16
SRRM4A7MD48 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 MYCLP1-201ENST00000372451 1075 ntBASIC14.05□□□□□ -0.16
SRRM4A7MD48 FAM220CP-201ENST00000395253 831 ntBASIC14.05□□□□□ -0.16
SRRM4A7MD48 PCED1CP-201ENST00000419887 785 ntBASIC14.05□□□□□ -0.16
SRRM4A7MD48 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SRRM4A7MD48 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRRM4A7MD48 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 AL121761.2-201ENST00000598007 1648 ntBASIC14.04□□□□□ -0.16
SRRM4A7MD48 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms