Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 CICP6-201ENST00000457191 2729 ntBASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF103-CHMP3A0A140T963 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 RASA4DP-201ENST00000460726 1199 ntBASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC024563.2-201ENST00000603282 481 ntBASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC106886.4-201ENST00000623557 2502 ntBASIC16.86■□□□□ 0.29
RNF103-CHMP3A0A140T963 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 AL136038.4-201ENST00000603606 1261 ntBASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 PCDHA14-201ENST00000506751 2298 ntBASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF103-CHMP3A0A140T963 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms