Protein–RNA interactions for Protein: Q9Y6F1

PARP3, Poly [ADP-ribose] polymerase 3, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP3Q9Y6F1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PARP3Q9Y6F1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.73■■□□□ 1.07
PARP3Q9Y6F1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.73■■□□□ 1.07
PARP3Q9Y6F1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.73■■□□□ 1.07
PARP3Q9Y6F1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PARP3Q9Y6F1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PARP3Q9Y6F1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.73■■□□□ 1.07
PARP3Q9Y6F1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.73■■□□□ 1.07
PARP3Q9Y6F1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PARP3Q9Y6F1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 AC009949.1-201ENST00000623048 1830 ntBASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 MIR661-201ENST00000384842 89 ntBASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 KLF2P3-201ENST00000451977 1087 ntBASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 AC079140.1-201ENST00000508039 487 ntBASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 AP001059.3-201ENST00000619053 235 ntBASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARP3Q9Y6F1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 FAM58DP-201ENST00000428076 619 ntBASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 NEFHP1-201ENST00000412845 2629 ntBASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.7■■□□□ 1.06
PARP3Q9Y6F1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 AC140658.5-201ENST00000438532 169 ntBASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 GAPDHP21-201ENST00000450301 1010 ntBASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 UGT1A2P-201ENST00000454886 866 ntBASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 RN7SL589P-201ENST00000481268 310 ntBASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.69■■□□□ 1.06
PARP3Q9Y6F1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms