Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 PCDHA12-202ENST00000613593 2588 ntBASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNPO3Q9Y5L0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 BX276092.5-203ENST00000456199 560 ntBASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AC009533.2-201ENST00000543664 586 ntBASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AC005336.2-201ENST00000593183 939 ntBASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AL121672.3-201ENST00000608644 468 ntBASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AC022211.2-201ENST00000585075 2527 ntBASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AC046185.3-201ENST00000623228 1824 ntBASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNPO3Q9Y5L0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 AL031133.1-201ENST00000406807 723 ntBASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 AL845331.1-201ENST00000424978 1190 ntBASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNPO3Q9Y5L0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms