Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC88CQ9P219 AL139288.1-201ENST00000623748 933 ntBASIC16.67■□□□□ 0.26
CCDC88CQ9P219 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC88CQ9P219 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC88CQ9P219 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 NKAPP1-205ENST00000585790 367 ntBASIC16.66■□□□□ 0.26
CCDC88CQ9P219 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCDC88CQ9P219 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 PGAM5P1-201ENST00000518923 814 ntBASIC16.65■□□□□ 0.26
CCDC88CQ9P219 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 RNA5SP415-201ENST00000517246 115 ntBASIC16.65■□□□□ 0.26
CCDC88CQ9P219 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 AL049840.3-201ENST00000602669 611 ntBASIC16.65■□□□□ 0.26
CCDC88CQ9P219 AC064862.7-201ENST00000604520 867 ntBASIC16.65■□□□□ 0.26
CCDC88CQ9P219 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 PRORSD1P-202ENST00000563365 2154 ntBASIC16.65■□□□□ 0.26
CCDC88CQ9P219 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC88CQ9P219 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.64■□□□□ 0.26
CCDC88CQ9P219 AL356309.3-201ENST00000624132 1934 ntBASIC16.64■□□□□ 0.25
CCDC88CQ9P219 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.64■□□□□ 0.25
CCDC88CQ9P219 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC88CQ9P219 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms