Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.61■□□□□ 0.57
CISHQ9NSE2 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.61■□□□□ 0.57
CISHQ9NSE2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CISHQ9NSE2 SIGLEC30P-201ENST00000455569 941 ntBASIC18.61■□□□□ 0.57
CISHQ9NSE2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CISHQ9NSE2 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.61■□□□□ 0.57
CISHQ9NSE2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.61■□□□□ 0.57
CISHQ9NSE2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.61■□□□□ 0.57
CISHQ9NSE2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.61■□□□□ 0.57
CISHQ9NSE2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CISHQ9NSE2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CISHQ9NSE2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CISHQ9NSE2 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.61■□□□□ 0.57
CISHQ9NSE2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
CISHQ9NSE2 AL356309.3-201ENST00000624132 1934 ntBASIC18.61■□□□□ 0.57
CISHQ9NSE2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 AL135999.2-201ENST00000622438 1686 ntBASIC18.6■□□□□ 0.57
CISHQ9NSE2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 AL023806.1-201ENST00000603994 1649 ntBASIC18.6■□□□□ 0.57
CISHQ9NSE2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 AC108860.2-201ENST00000562760 2183 ntBASIC18.6■□□□□ 0.57
CISHQ9NSE2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 RN7SL510P-201ENST00000581311 263 ntBASIC18.6■□□□□ 0.57
CISHQ9NSE2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 NKAPP1-205ENST00000585790 367 ntBASIC18.6■□□□□ 0.57
CISHQ9NSE2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.6■□□□□ 0.57
CISHQ9NSE2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CISHQ9NSE2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 BX005266.1-201ENST00000473402 457 ntBASIC18.59■□□□□ 0.57
CISHQ9NSE2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 AL139288.1-201ENST00000623748 933 ntBASIC18.59■□□□□ 0.57
CISHQ9NSE2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.59■□□□□ 0.57
CISHQ9NSE2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CISHQ9NSE2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CISHQ9NSE2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.58■□□□□ 0.57
CISHQ9NSE2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CISHQ9NSE2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CISHQ9NSE2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.58■□□□□ 0.57
CISHQ9NSE2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CISHQ9NSE2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.58■□□□□ 0.57
CISHQ9NSE2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CISHQ9NSE2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CISHQ9NSE2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.58■□□□□ 0.57
CISHQ9NSE2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CISHQ9NSE2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms