Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 AL049757.1-201ENST00000616842 1596 ntBASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 AC003669.1-201ENST00000334569 611 ntBASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 DUSP5P1-201ENST00000441325 1139 ntBASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 KRT126P-201ENST00000549467 1181 ntBASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 IFNL4P1-201ENST00000607083 540 ntBASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 AL732292.2-201ENST00000609649 430 ntBASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 AC019129.2-201ENST00000609837 1235 ntBASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 LINC00304-203ENST00000565008 1864 ntBASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHAF3Q9NRP4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 KRT8P10-201ENST00000450021 1447 ntBASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 AC073592.5-201ENST00000624854 528 ntBASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 AP000867.4-201ENST00000641616 219 ntBASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 AL355312.1-201ENST00000407115 2176 ntBASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHAF3Q9NRP4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 AP005117.1-201ENST00000584346 1413 ntBASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 AC004870.1-201ENST00000315132 882 ntBASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms