Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 KRT18P65-201ENST00000439811 1286 ntBASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 UBALD1-205ENST00000590891 2641 ntBASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 KRT18P22-201ENST00000402024 1347 ntBASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 AC024563.2-201ENST00000603282 481 ntBASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 HYMAI-201ENST00000635591 3347 ntBASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB16Q9NRJ7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 LINC00602-201ENST00000629776 2065 ntBASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms