Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 LINC00304-203ENST00000565008 1864 ntBASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 AC148477.5-201ENST00000625164 1645 ntBASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 LINC01451-201ENST00000623792 534 ntBASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 AL513210.1-201ENST00000629608 234 ntBASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM7Q9NR12 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 AC096734.2-201ENST00000562054 433 ntBASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 AC138761.1-201ENST00000584393 385 ntBASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 AC004835.2-201ENST00000603762 682 ntBASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM7Q9NR12 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 AC005498.2-205ENST00000593218 784 ntBASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM7Q9NR12 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms