Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GCM1Q9NP62 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GCM1Q9NP62 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
GCM1Q9NP62 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
GCM1Q9NP62 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GCM1Q9NP62 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 PCDHB18P-201ENST00000524813 2368 ntBASIC14.95□□□□□ -0.02
GCM1Q9NP62 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 AC111152.3-201ENST00000569699 673 ntBASIC14.95□□□□□ -0.02
GCM1Q9NP62 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GCM1Q9NP62 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
GCM1Q9NP62 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 AC006116.8-202ENST00000587620 1550 ntBASIC14.94□□□□□ -0.02
GCM1Q9NP62 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 IFNL4P1-201ENST00000607083 540 ntBASIC14.94□□□□□ -0.02
GCM1Q9NP62 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.94□□□□□ -0.02
GCM1Q9NP62 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GCM1Q9NP62 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GCM1Q9NP62 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GCM1Q9NP62 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GCM1Q9NP62 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.93□□□□□ -0.02
GCM1Q9NP62 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GCM1Q9NP62 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.93□□□□□ -0.02
GCM1Q9NP62 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GCM1Q9NP62 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GCM1Q9NP62 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GCM1Q9NP62 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms