Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 AC016396.2-201ENST00000562575 1417 ntBASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 BX664615.1-201ENST00000443558 458 ntBASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 KRT18P57-201ENST00000443599 1254 ntBASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 AL031432.5-201ENST00000641059 760 ntBASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
THUMPD3Q9BV44 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 AC024563.2-201ENST00000603282 481 ntBASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 AC139887.4-201ENST00000607877 719 ntBASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 UBALD1-205ENST00000590891 2641 ntBASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
THUMPD3Q9BV44 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 LYSMD4-203ENST00000378904 2122 ntBASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 AL441883.1-201ENST00000566170 1045 ntBASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.71■□□□□ 0.27
THUMPD3Q9BV44 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms