Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC009477.1-201ENST00000452936 217 ntBASIC22.94■■□□□ 1.26
ABCA3Q99758 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC22.94■■□□□ 1.26
ABCA3Q99758 AL359881.2-201ENST00000602973 570 ntBASIC22.94■■□□□ 1.26
ABCA3Q99758 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC22.94■■□□□ 1.26
ABCA3Q99758 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.94■■□□□ 1.26
ABCA3Q99758 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC22.94■■□□□ 1.26
ABCA3Q99758 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
ABCA3Q99758 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ABCA3Q99758 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC22.94■■□□□ 1.26
ABCA3Q99758 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC22.94■■□□□ 1.26
ABCA3Q99758 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC22.94■■□□□ 1.26
ABCA3Q99758 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC22.94■■□□□ 1.26
ABCA3Q99758 IFT20-216ENST00000588477 774 ntTSL 5 BASIC22.94■■□□□ 1.26
ABCA3Q99758 AC027307.3-201ENST00000594262 1100 ntBASIC22.94■■□□□ 1.26
ABCA3Q99758 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC22.94■■□□□ 1.26
ABCA3Q99758 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
ABCA3Q99758 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ABCA3Q99758 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
ABCA3Q99758 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.93■■□□□ 1.26
ABCA3Q99758 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
ABCA3Q99758 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ABCA3Q99758 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ABCA3Q99758 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ABCA3Q99758 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC22.93■■□□□ 1.26
ABCA3Q99758 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ABCA3Q99758 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.93■■□□□ 1.26
ABCA3Q99758 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ABCA3Q99758 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ABCA3Q99758 PGF-202ENST00000405431 666 ntTSL 5 BASIC22.93■■□□□ 1.26
ABCA3Q99758 AC142381.1-201ENST00000426099 345 ntBASIC22.93■■□□□ 1.26
ABCA3Q99758 NME2P1-201ENST00000426182 414 ntBASIC22.93■■□□□ 1.26
ABCA3Q99758 MIR4453-201ENST00000584019 89 ntBASIC22.93■■□□□ 1.26
ABCA3Q99758 AC027307.2-201ENST00000591252 911 ntBASIC22.93■■□□□ 1.26
ABCA3Q99758 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.93■■□□□ 1.26
ABCA3Q99758 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC22.93■■□□□ 1.26
ABCA3Q99758 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA3Q99758 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.92■■□□□ 1.26
ABCA3Q99758 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.92■■□□□ 1.26
ABCA3Q99758 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
ABCA3Q99758 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA3Q99758 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA3Q99758 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA3Q99758 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC22.92■■□□□ 1.26
ABCA3Q99758 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC22.92■■□□□ 1.26
ABCA3Q99758 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.92■■□□□ 1.26
ABCA3Q99758 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC22.92■■□□□ 1.26
ABCA3Q99758 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC22.92■■□□□ 1.26
ABCA3Q99758 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
ABCA3Q99758 AC140912.1-201ENST00000577171 1054 ntBASIC22.92■■□□□ 1.26
ABCA3Q99758 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC22.92■■□□□ 1.26
ABCA3Q99758 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA3Q99758 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC22.91■■□□□ 1.26
ABCA3Q99758 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC22.91■■□□□ 1.26
ABCA3Q99758 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.91■■□□□ 1.26
ABCA3Q99758 IGHV3-62-201ENST00000520057 340 ntBASIC22.91■■□□□ 1.26
ABCA3Q99758 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
ABCA3Q99758 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 AC007967.4-201ENST00000614700 386 ntBASIC22.91■■□□□ 1.26
ABCA3Q99758 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
ABCA3Q99758 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.91■■□□□ 1.26
ABCA3Q99758 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 SLC22A20-204ENST00000530038 1673 ntBASIC22.91■■□□□ 1.26
ABCA3Q99758 AC016027.1-202ENST00000607927 1699 ntBASIC22.91■■□□□ 1.26
ABCA3Q99758 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.91■■□□□ 1.26
ABCA3Q99758 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
ABCA3Q99758 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.91■■□□□ 1.26
ABCA3Q99758 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
ABCA3Q99758 ARSEP1-201ENST00000420443 635 ntBASIC22.91■■□□□ 1.26
ABCA3Q99758 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.91■■□□□ 1.26
ABCA3Q99758 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ABCA3Q99758 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC22.91■■□□□ 1.26
ABCA3Q99758 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ABCA3Q99758 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms