Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.6■□□□□ 0.09
SPENQ96T58 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPENQ96T58 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPENQ96T58 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.6■□□□□ 0.09
SPENQ96T58 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.6■□□□□ 0.09
SPENQ96T58 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPENQ96T58 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.6■□□□□ 0.09
SPENQ96T58 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPENQ96T58 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPENQ96T58 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SPENQ96T58 SPCS2P4-201ENST00000436160 681 ntBASIC15.59■□□□□ 0.09
SPENQ96T58 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.59■□□□□ 0.09
SPENQ96T58 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.59■□□□□ 0.09
SPENQ96T58 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
SPENQ96T58 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SPENQ96T58 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 OR8S1-201ENST00000310194 1080 ntBASIC15.59■□□□□ 0.09
SPENQ96T58 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.59■□□□□ 0.09
SPENQ96T58 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.59■□□□□ 0.09
SPENQ96T58 AC025048.6-201ENST00000634326 1161 ntBASIC15.59■□□□□ 0.09
SPENQ96T58 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SPENQ96T58 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SPENQ96T58 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.59■□□□□ 0.09
SPENQ96T58 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 COX5BP2-201ENST00000392354 334 ntBASIC15.59■□□□□ 0.09
SPENQ96T58 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.59■□□□□ 0.09
SPENQ96T58 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.59■□□□□ 0.09
SPENQ96T58 AL353135.1-201ENST00000606729 504 ntBASIC15.59■□□□□ 0.09
SPENQ96T58 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.59■□□□□ 0.09
SPENQ96T58 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.59■□□□□ 0.09
SPENQ96T58 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPENQ96T58 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.58■□□□□ 0.09
SPENQ96T58 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.58■□□□□ 0.09
SPENQ96T58 AC069335.1-201ENST00000489972 472 ntBASIC15.58■□□□□ 0.09
SPENQ96T58 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.58■□□□□ 0.09
SPENQ96T58 AC107918.2-201ENST00000530817 355 ntBASIC15.58■□□□□ 0.09
SPENQ96T58 AL512356.2-201ENST00000546955 174 ntBASIC15.58■□□□□ 0.09
SPENQ96T58 AC243562.1-201ENST00000560672 389 ntBASIC15.58■□□□□ 0.09
SPENQ96T58 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SPENQ96T58 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPENQ96T58 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.58■□□□□ 0.08
SPENQ96T58 TREML5P-201ENST00000421694 576 ntBASIC15.58■□□□□ 0.08
SPENQ96T58 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.58■□□□□ 0.08
SPENQ96T58 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.58■□□□□ 0.08
SPENQ96T58 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.58■□□□□ 0.08
SPENQ96T58 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SPENQ96T58 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.58■□□□□ 0.08
SPENQ96T58 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SPENQ96T58 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.58■□□□□ 0.08
SPENQ96T58 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.58■□□□□ 0.08
SPENQ96T58 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
SPENQ96T58 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.58■□□□□ 0.08
SPENQ96T58 SPTLC1P1-201ENST00000447199 261 ntBASIC15.58■□□□□ 0.08
SPENQ96T58 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SPENQ96T58 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.58■□□□□ 0.08
SPENQ96T58 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SPENQ96T58 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SPENQ96T58 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPENQ96T58 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SPENQ96T58 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.57■□□□□ 0.08
SPENQ96T58 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms