Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GIMAP3P-201ENST00000495150 836 ntBASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 KRT8P23-201ENST00000560090 1207 ntBASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD1Q96PZ7 AC009113.1-201ENST00000570267 2443 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 AC022144.1-201ENST00000602255 1580 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 AL353593.2-201ENST00000602529 1483 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 MIR658-201ENST00000385210 100 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 DDX43P3-201ENST00000441064 443 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 SPDYE11-202ENST00000450699 704 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 SPDYE9P-201ENST00000570642 692 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 SPDYE10P-202ENST00000612005 668 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 SPDYE8P-202ENST00000612377 668 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 AL512384.1-201ENST00000406683 331 ntBASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD1Q96PZ7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 AC106820.2-201ENST00000563775 3264 ntBASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 AL592309.1-201ENST00000443127 649 ntBASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms