Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 AC010327.4-202ENST00000591484 748 ntBASIC20.29■□□□□ 0.84
CCDC17Q96LX7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 AL355312.1-201ENST00000407115 2176 ntBASIC20.29■□□□□ 0.84
CCDC17Q96LX7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC17Q96LX7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 PAWRP1-201ENST00000451083 565 ntBASIC20.28■□□□□ 0.84
CCDC17Q96LX7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC17Q96LX7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 RHOQP3-201ENST00000437982 621 ntBASIC20.27■□□□□ 0.84
CCDC17Q96LX7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 AC018845.2-201ENST00000568326 409 ntBASIC20.27■□□□□ 0.84
CCDC17Q96LX7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC17Q96LX7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC17Q96LX7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 AC055717.3-201ENST00000622967 595 ntBASIC20.26■□□□□ 0.83
CCDC17Q96LX7 AC092865.6-201ENST00000642101 219 ntBASIC20.26■□□□□ 0.83
CCDC17Q96LX7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms