Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 DDX43P3-201ENST00000441064 443 ntBASIC20.28■□□□□ 0.84
PGBD1Q96JS3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 AL691432.3-201ENST00000621860 400 ntBASIC20.28■□□□□ 0.84
PGBD1Q96JS3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PGBD1Q96JS3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 KRT16P4-201ENST00000453883 522 ntBASIC20.27■□□□□ 0.84
PGBD1Q96JS3 AC132008.2-207ENST00000454517 770 ntBASIC20.27■□□□□ 0.84
PGBD1Q96JS3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PGBD1Q96JS3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD1Q96JS3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 AC116407.2-201ENST00000613639 860 ntBASIC20.26■□□□□ 0.83
PGBD1Q96JS3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 AL121761.2-201ENST00000598007 1648 ntBASIC20.26■□□□□ 0.83
PGBD1Q96JS3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD1Q96JS3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms