Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HDAC11Q96DB2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18■□□□□ 0.47
HDAC11Q96DB2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18■□□□□ 0.47
HDAC11Q96DB2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 AC012615.1-201ENST00000565797 1299 ntBASIC18■□□□□ 0.47
HDAC11Q96DB2 AC109462.3-201ENST00000573934 613 ntBASIC18■□□□□ 0.47
HDAC11Q96DB2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18■□□□□ 0.47
HDAC11Q96DB2 AC092119.3-201ENST00000612618 583 ntBASIC18■□□□□ 0.47
HDAC11Q96DB2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 AL023806.1-201ENST00000603994 1649 ntBASIC18■□□□□ 0.47
HDAC11Q96DB2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HDAC11Q96DB2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18■□□□□ 0.47
HDAC11Q96DB2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HDAC11Q96DB2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 CROCCP2-202ENST00000412962 2773 ntBASIC18■□□□□ 0.47
HDAC11Q96DB2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18■□□□□ 0.47
HDAC11Q96DB2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18■□□□□ 0.47
HDAC11Q96DB2 TP73-AS1-210ENST00000637775 1455 ntBASIC18■□□□□ 0.47
HDAC11Q96DB2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HDAC11Q96DB2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC11Q96DB2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 MINOS1P3-201ENST00000457048 203 ntBASIC17.99■□□□□ 0.47
HDAC11Q96DB2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 IGHV3-52-201ENST00000519770 353 ntBASIC17.99■□□□□ 0.47
HDAC11Q96DB2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 AC074051.2-201ENST00000565115 352 ntBASIC17.99■□□□□ 0.47
HDAC11Q96DB2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 AC092329.2-201ENST00000598402 547 ntBASIC17.99■□□□□ 0.47
HDAC11Q96DB2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.99■□□□□ 0.47
HDAC11Q96DB2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 AC104819.1-201ENST00000504587 486 ntBASIC17.98■□□□□ 0.47
HDAC11Q96DB2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 AC096582.2-201ENST00000510860 516 ntBASIC17.98■□□□□ 0.47
HDAC11Q96DB2 AP000867.3-201ENST00000524675 377 ntBASIC17.98■□□□□ 0.47
HDAC11Q96DB2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.98■□□□□ 0.47
HDAC11Q96DB2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 INTS4P1-201ENST00000438455 1935 ntBASIC17.98■□□□□ 0.47
HDAC11Q96DB2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.98■□□□□ 0.47
HDAC11Q96DB2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HDAC11Q96DB2 NFIC-211ENST00000641145 8399 ntBASIC17.97■□□□□ 0.47
HDAC11Q96DB2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC11Q96DB2 AL353593.2-201ENST00000602529 1483 ntBASIC17.97■□□□□ 0.47
HDAC11Q96DB2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.97■□□□□ 0.47
HDAC11Q96DB2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC11Q96DB2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms