Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 KLF4P1-201ENST00000412782 1185 ntBASIC15.71■□□□□ 0.11
CPNE4Q96A23 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 HLA-J-201ENST00000462773 1622 ntBASIC15.71■□□□□ 0.11
CPNE4Q96A23 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 PCDHB18P-201ENST00000524813 2368 ntBASIC15.71■□□□□ 0.11
CPNE4Q96A23 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE4Q96A23 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE4Q96A23 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CPNE4Q96A23 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.71■□□□□ 0.1
CPNE4Q96A23 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.71■□□□□ 0.1
CPNE4Q96A23 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE4Q96A23 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.71■□□□□ 0.1
CPNE4Q96A23 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE4Q96A23 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 LINC00304-203ENST00000565008 1864 ntBASIC15.7■□□□□ 0.1
CPNE4Q96A23 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.7■□□□□ 0.1
CPNE4Q96A23 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 NOC2LP2-201ENST00000407594 1944 ntBASIC15.7■□□□□ 0.1
CPNE4Q96A23 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CPNE4Q96A23 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE4Q96A23 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 SIGLEC16-201ENST00000599858 1437 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 AC079776.2-201ENST00000641154 1609 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 AL020989.1-201ENST00000422979 469 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 FGFR3P6-201ENST00000457012 610 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 STK19B-204ENST00000512515 211 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 STK25P1-201ENST00000585406 838 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 AC064862.7-201ENST00000604520 867 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 AC073592.4-201ENST00000623827 446 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 AC133963.1-201ENST00000504166 1679 ntBASIC15.69■□□□□ 0.1
CPNE4Q96A23 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE4Q96A23 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE4Q96A23 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms