Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 AL390719.2-201ENST00000606993 987 ntBASIC19.71■□□□□ 0.75
SMARCE1Q969G3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 AC011676.5-201ENST00000624864 2660 ntBASIC19.71■□□□□ 0.75
SMARCE1Q969G3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.71■□□□□ 0.74
SMARCE1Q969G3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.71■□□□□ 0.74
SMARCE1Q969G3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 AL139327.4-201ENST00000612362 153 ntBASIC19.7■□□□□ 0.74
SMARCE1Q969G3 HYMAI.1-201ENST00000620949 238 ntBASIC19.7■□□□□ 0.74
SMARCE1Q969G3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCE1Q969G3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 AK4P3-201ENST00000418260 669 ntBASIC19.69■□□□□ 0.74
SMARCE1Q969G3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 AC006011.2-201ENST00000621313 1158 ntBASIC19.69■□□□□ 0.74
SMARCE1Q969G3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.69■□□□□ 0.74
SMARCE1Q969G3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 Z83836.1-201ENST00000624605 1642 ntBASIC19.69■□□□□ 0.74
SMARCE1Q969G3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCE1Q969G3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms