Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP13Q92995 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.3■□□□□ 0.52
USP13Q92995 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.3■□□□□ 0.52
USP13Q92995 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP13Q92995 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.3■□□□□ 0.52
USP13Q92995 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.3■□□□□ 0.52
USP13Q92995 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
USP13Q92995 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP13Q92995 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.29■□□□□ 0.52
USP13Q92995 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.29■□□□□ 0.52
USP13Q92995 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.29■□□□□ 0.52
USP13Q92995 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP13Q92995 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.29■□□□□ 0.52
USP13Q92995 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USP13Q92995 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 AC132938.5-201ENST00000624980 1813 ntBASIC18.29■□□□□ 0.52
USP13Q92995 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.29■□□□□ 0.52
USP13Q92995 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.29■□□□□ 0.52
USP13Q92995 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.29■□□□□ 0.52
USP13Q92995 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.29■□□□□ 0.52
USP13Q92995 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
USP13Q92995 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.29■□□□□ 0.52
USP13Q92995 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.29■□□□□ 0.52
USP13Q92995 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
USP13Q92995 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.29■□□□□ 0.52
USP13Q92995 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
USP13Q92995 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
USP13Q92995 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.29■□□□□ 0.52
USP13Q92995 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP13Q92995 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.28■□□□□ 0.52
USP13Q92995 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
USP13Q92995 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
USP13Q92995 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP13Q92995 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.28■□□□□ 0.52
USP13Q92995 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP13Q92995 AC073621.1-201ENST00000392730 636 ntBASIC18.28■□□□□ 0.52
USP13Q92995 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.28■□□□□ 0.52
USP13Q92995 MIR1233-2-201ENST00000408138 82 ntBASIC18.28■□□□□ 0.52
USP13Q92995 MIR1233-1-201ENST00000408722 82 ntBASIC18.28■□□□□ 0.52
USP13Q92995 AL020989.1-201ENST00000422979 469 ntBASIC18.28■□□□□ 0.52
USP13Q92995 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.28■□□□□ 0.52
USP13Q92995 AC009947.1-201ENST00000444350 727 ntBASIC18.28■□□□□ 0.52
USP13Q92995 KRT18P3-201ENST00000451602 1288 ntBASIC18.28■□□□□ 0.52
USP13Q92995 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
USP13Q92995 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
USP13Q92995 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.28■□□□□ 0.52
USP13Q92995 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.28■□□□□ 0.52
USP13Q92995 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.28■□□□□ 0.52
USP13Q92995 AC006557.2-201ENST00000592985 1240 ntBASIC18.28■□□□□ 0.52
USP13Q92995 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.28■□□□□ 0.52
USP13Q92995 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
USP13Q92995 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
USP13Q92995 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP13Q92995 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.27■□□□□ 0.52
USP13Q92995 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.27■□□□□ 0.52
USP13Q92995 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.27■□□□□ 0.52
USP13Q92995 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP13Q92995 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP13Q92995 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms