Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL121772.3-201ENST00000610840 674 ntBASIC17.71■□□□□ 0.43
PTCD2Q8WV60 AC106820.2-201ENST00000563775 3264 ntBASIC17.71■□□□□ 0.43
PTCD2Q8WV60 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.71■□□□□ 0.43
PTCD2Q8WV60 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
PTCD2Q8WV60 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTCD2Q8WV60 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTCD2Q8WV60 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.71■□□□□ 0.42
PTCD2Q8WV60 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTCD2Q8WV60 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 AC007967.3-201ENST00000434308 558 ntBASIC17.7■□□□□ 0.42
PTCD2Q8WV60 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 AC122714.2-201ENST00000502787 707 ntBASIC17.7■□□□□ 0.42
PTCD2Q8WV60 AC096582.2-201ENST00000510860 516 ntBASIC17.7■□□□□ 0.42
PTCD2Q8WV60 ADAM3B-201ENST00000569937 840 ntBASIC17.7■□□□□ 0.42
PTCD2Q8WV60 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.7■□□□□ 0.42
PTCD2Q8WV60 AL138831.2-201ENST00000606564 490 ntBASIC17.7■□□□□ 0.42
PTCD2Q8WV60 TMEM14EP-202ENST00000639378 1296 ntBASIC17.7■□□□□ 0.42
PTCD2Q8WV60 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 PRORSD1P-202ENST00000563365 2154 ntBASIC17.7■□□□□ 0.42
PTCD2Q8WV60 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCD2Q8WV60 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 AC079781.3-201ENST00000449110 356 ntBASIC17.69■□□□□ 0.42
PTCD2Q8WV60 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCD2Q8WV60 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms