Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 INGX-202ENST00000489074 768 ntBASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 AC093214.1-201ENST00000511688 1107 ntBASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 AC005225.4-201ENST00000557330 545 ntBASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 AC009093.7-201ENST00000623853 1223 ntBASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 SIRPAP1-201ENST00000448467 1770 ntBASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 TERF1P3-201ENST00000505638 1227 ntBASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNIP1Q8TAD8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 CXCL1P1-201ENST00000502804 216 ntBASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.42■□□□□ 0.22
SNIP1Q8TAD8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms