Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NUP43Q8NFH3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NUP43Q8NFH3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NUP43Q8NFH3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NUP43Q8NFH3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 OR6D1P-203ENST00000641209 4860 ntBASIC16.36■□□□□ 0.21
NUP43Q8NFH3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 KRT8P10-201ENST00000450021 1447 ntBASIC16.36■□□□□ 0.21
NUP43Q8NFH3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NUP43Q8NFH3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.35■□□□□ 0.21
NUP43Q8NFH3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.35■□□□□ 0.21
NUP43Q8NFH3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.35■□□□□ 0.21
NUP43Q8NFH3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 MIR3180-1-201ENST00000580374 94 ntBASIC16.35■□□□□ 0.21
NUP43Q8NFH3 MIR3180-3-201ENST00000584616 94 ntBASIC16.35■□□□□ 0.21
NUP43Q8NFH3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 AC080080.1-201ENST00000625121 2420 ntBASIC16.35■□□□□ 0.21
NUP43Q8NFH3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.35■□□□□ 0.21
NUP43Q8NFH3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 AP000867.3-201ENST00000524675 377 ntBASIC16.34■□□□□ 0.21
NUP43Q8NFH3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 AC074051.2-201ENST00000565115 352 ntBASIC16.34■□□□□ 0.21
NUP43Q8NFH3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 NPAP1P7-201ENST00000613027 823 ntBASIC16.34■□□□□ 0.21
NUP43Q8NFH3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms