Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH20Q8N6Y1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH20Q8N6Y1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 KRT18P67-201ENST00000432816 1264 ntBASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 SLC25A6P4-201ENST00000586535 553 ntBASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 AC019129.2-201ENST00000609837 1235 ntBASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 AC073592.5-201ENST00000624854 528 ntBASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PCDH20Q8N6Y1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 AF186996.4-201ENST00000467186 377 ntBASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 AC002558.1-201ENST00000488906 803 ntBASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 AC073648.2-201ENST00000510116 352 ntBASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH20Q8N6Y1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 AC079776.2-201ENST00000641154 1609 ntBASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 MRPL3P1-201ENST00000400109 1033 ntBASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 IGHV3-52-201ENST00000519770 353 ntBASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 SART3-203ENST00000546611 1184 ntBASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 AC109462.3-201ENST00000573934 613 ntBASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 AC073592.4-201ENST00000623827 446 ntBASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms