Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.84■□□□□ 0.45
SIX5Q8N196 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 INGX-202ENST00000489074 768 ntBASIC17.84■□□□□ 0.45
SIX5Q8N196 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.84■□□□□ 0.45
SIX5Q8N196 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.84■□□□□ 0.45
SIX5Q8N196 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.84■□□□□ 0.45
SIX5Q8N196 DUX4L27-201ENST00000554796 1261 ntBASIC17.84■□□□□ 0.45
SIX5Q8N196 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
SIX5Q8N196 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIX5Q8N196 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.83■□□□□ 0.45
SIX5Q8N196 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
SIX5Q8N196 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.83■□□□□ 0.45
SIX5Q8N196 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIX5Q8N196 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.83■□□□□ 0.45
SIX5Q8N196 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIX5Q8N196 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.83■□□□□ 0.45
SIX5Q8N196 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIX5Q8N196 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.83■□□□□ 0.44
SIX5Q8N196 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.83■□□□□ 0.44
SIX5Q8N196 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.83■□□□□ 0.44
SIX5Q8N196 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.83■□□□□ 0.44
SIX5Q8N196 DDX43P3-201ENST00000441064 443 ntBASIC17.83■□□□□ 0.44
SIX5Q8N196 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.83■□□□□ 0.44
SIX5Q8N196 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SIX5Q8N196 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.83■□□□□ 0.44
SIX5Q8N196 CXCL1P1-201ENST00000502804 216 ntBASIC17.83■□□□□ 0.44
SIX5Q8N196 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
SIX5Q8N196 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.83■□□□□ 0.44
SIX5Q8N196 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SIX5Q8N196 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.83■□□□□ 0.44
SIX5Q8N196 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SIX5Q8N196 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
SIX5Q8N196 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX5Q8N196 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.82■□□□□ 0.44
SIX5Q8N196 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX5Q8N196 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX5Q8N196 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX5Q8N196 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX5Q8N196 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 AC067863.1-201ENST00000494933 530 ntBASIC17.82■□□□□ 0.44
SIX5Q8N196 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.82■□□□□ 0.44
SIX5Q8N196 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.82■□□□□ 0.44
SIX5Q8N196 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 AC018445.3-201ENST00000624177 1945 ntBASIC17.82■□□□□ 0.44
SIX5Q8N196 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX5Q8N196 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SIX5Q8N196 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX5Q8N196 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIX5Q8N196 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX5Q8N196 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SIX5Q8N196 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SIX5Q8N196 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX5Q8N196 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX5Q8N196 AC092919.2-201ENST00000623631 1645 ntBASIC17.81■□□□□ 0.44
SIX5Q8N196 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX5Q8N196 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIX5Q8N196 GK-202ENST00000378941 458 ntTSL 3 BASIC17.81■□□□□ 0.44
SIX5Q8N196 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.81■□□□□ 0.44
SIX5Q8N196 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms