Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 AP005117.1-201ENST00000584346 1413 ntBASIC16.71■□□□□ 0.27
RAB43Q86YS6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 FAM220CP-201ENST00000395253 831 ntBASIC16.71■□□□□ 0.27
RAB43Q86YS6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 AC148477.8-201ENST00000624298 468 ntBASIC16.71■□□□□ 0.27
RAB43Q86YS6 AC117500.6-201ENST00000624871 588 ntBASIC16.71■□□□□ 0.27
RAB43Q86YS6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RAB43Q86YS6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB43Q86YS6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB43Q86YS6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
RAB43Q86YS6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB43Q86YS6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.71■□□□□ 0.26
RAB43Q86YS6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.7■□□□□ 0.26
RAB43Q86YS6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 AC139887.3-201ENST00000568585 713 ntBASIC16.7■□□□□ 0.26
RAB43Q86YS6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 AF228730.7-201ENST00000641842 219 ntBASIC16.7■□□□□ 0.26
RAB43Q86YS6 FER1L4-210ENST00000615531 5998 ntBASIC16.7■□□□□ 0.26
RAB43Q86YS6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 AC126763.1-201ENST00000552015 2118 ntBASIC16.7■□□□□ 0.26
RAB43Q86YS6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB43Q86YS6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB43Q86YS6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms