Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 RPSAP43-201ENST00000402237 625 ntBASIC19.45■□□□□ 0.7
TRIM50Q86XT4 LINC00982-205ENST00000420957 435 ntBASIC19.45■□□□□ 0.7
TRIM50Q86XT4 UPF3AP3-201ENST00000420996 769 ntBASIC19.45■□□□□ 0.7
TRIM50Q86XT4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 IGHV3-65-201ENST00000523210 341 ntBASIC19.45■□□□□ 0.7
TRIM50Q86XT4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AC018845.2-201ENST00000568326 409 ntBASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AL353135.1-201ENST00000606729 504 ntBASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AC008667.4-201ENST00000607370 168 ntBASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AL691403.2-201ENST00000618460 490 ntBASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AC004790.2-201ENST00000623588 572 ntBASIC19.44■□□□□ 0.7
TRIM50Q86XT4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM50Q86XT4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 PTCHD3P3-201ENST00000403073 906 ntBASIC19.43■□□□□ 0.7
TRIM50Q86XT4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 AC002347.1-201ENST00000569543 541 ntBASIC19.43■□□□□ 0.7
TRIM50Q86XT4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.43■□□□□ 0.7
TRIM50Q86XT4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 AL805961.1-202ENST00000641562 540 ntBASIC19.43■□□□□ 0.7
TRIM50Q86XT4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM50Q86XT4 AC012317.2-201ENST00000623305 2251 ntBASIC19.42■□□□□ 0.7
TRIM50Q86XT4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 AL354751.1-201ENST00000412768 1863 ntBASIC19.42■□□□□ 0.7
TRIM50Q86XT4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 AC004832.2-201ENST00000426397 482 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms