Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTTNQ86VV8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTTNQ86VV8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTTNQ86VV8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTTNQ86VV8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTTNQ86VV8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.45■□□□□ 0.06
RTTNQ86VV8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTTNQ86VV8 AC141586.5-201ENST00000624546 2050 ntBASIC15.45■□□□□ 0.06
RTTNQ86VV8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.45■□□□□ 0.06
RTTNQ86VV8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTTNQ86VV8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTTNQ86VV8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RTTNQ86VV8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 TSPY19P-201ENST00000418461 509 ntBASIC15.44■□□□□ 0.06
RTTNQ86VV8 IGHV3-47-201ENST00000425060 335 ntBASIC15.44■□□□□ 0.06
RTTNQ86VV8 TSPY18P-201ENST00000441642 509 ntBASIC15.44■□□□□ 0.06
RTTNQ86VV8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 AC090616.6-201ENST00000582640 721 ntBASIC15.44■□□□□ 0.06
RTTNQ86VV8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 AC008687.5-201ENST00000593746 558 ntBASIC15.44■□□□□ 0.06
RTTNQ86VV8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTTNQ86VV8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RTTNQ86VV8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 BX276092.7-203ENST00000637198 1536 ntBASIC15.43■□□□□ 0.06
RTTNQ86VV8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 LINC00265-3P-201ENST00000447588 903 ntBASIC15.43■□□□□ 0.06
RTTNQ86VV8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 KRT18P31-201ENST00000506277 1292 ntBASIC15.43■□□□□ 0.06
RTTNQ86VV8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 AC140113.2-201ENST00000604370 208 ntBASIC15.43■□□□□ 0.06
RTTNQ86VV8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.43■□□□□ 0.06
RTTNQ86VV8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTTNQ86VV8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RTTNQ86VV8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.42■□□□□ 0.06
RTTNQ86VV8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.42■□□□□ 0.06
RTTNQ86VV8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.42■□□□□ 0.06
RTTNQ86VV8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTTNQ86VV8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.42■□□□□ 0.06
RTTNQ86VV8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms